Cluster: HRGMv2_4531_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4531
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4531_2 | HRGMv2_4531_2_31 | 25762 | 26451 | - | 9.B.18.1.2 |
| pfam | HRGMv2_4531_2 | HRGMv2_4531_2_32 | 26456 | 26923 | - | VanZ |
| pfam | HRGMv2_4531_2 | HRGMv2_4531_2_33 | 26934 | 27689 | - | CpsB_CapC |
| TC | HRGMv2_4531_2 | HRGMv2_4531_2_34 | 27643 | 28359 | - | 8.A.3.2.1 |
| pfam | HRGMv2_4531_2 | HRGMv2_4531_2_35 | 28346 | 29056 | - | Wzz |
| CAZyme | HRGMv2_4531_2 | HRGMv2_4531_2_36 | 29346 | 31778 | - | GH51_4 |
| pfam | HRGMv2_4531_2 | HRGMv2_4531_2_37 | 31919 | 32434 | - | DUF4352 |
| CAZyme | HRGMv2_4531_2 | HRGMv2_4531_2_38 | 32580 | 37007 | - | GH28 |
Gene ID: HRGMv2_4531_2_31
Type: TC
Location: 25762 - 26451 (-)
Type: TC
Location: 25762 - 26451 (-)
Gene ID: HRGMv2_4531_2_32
Type: pfam
Location: 26456 - 26923 (-)
Type: pfam
Location: 26456 - 26923 (-)
Gene ID: HRGMv2_4531_2_33
Type: pfam
Location: 26934 - 27689 (-)
Type: pfam
Location: 26934 - 27689 (-)
Gene ID: HRGMv2_4531_2_34
Type: TC
Location: 27643 - 28359 (-)
Type: TC
Location: 27643 - 28359 (-)
Gene ID: HRGMv2_4531_2_35
Type: pfam
Location: 28346 - 29056 (-)
Type: pfam
Location: 28346 - 29056 (-)
Gene ID: HRGMv2_4531_2_36
Type: CAZyme
Location: 29346 - 31778 (-)
Type: CAZyme
Location: 29346 - 31778 (-)
Gene ID: HRGMv2_4531_2_37
Type: pfam
Location: 31919 - 32434 (-)
Type: pfam
Location: 31919 - 32434 (-)
Gene ID: HRGMv2_4531_2_38
Type: CAZyme
Location: 32580 - 37007 (-)
Type: CAZyme
Location: 32580 - 37007 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.