Cluster: HRGMv2_4531_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4531
- CGC Family ID: CGCFAM_03884
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4531_1 | HRGMv2_4531_1_42 | 72751 | 73953 | + | GH105 |
| CAZyme | HRGMv2_4531_1 | HRGMv2_4531_1_43 | 74258 | 77353 | + | GH38 |
| TC | HRGMv2_4531_1 | HRGMv2_4531_1_44 | 77428 | 79200 | - | 3.A.1.135.5 |
| TC | HRGMv2_4531_1 | HRGMv2_4531_1_45 | 79190 | 80908 | - | 3.A.1.135.7 |
Gene ID: HRGMv2_4531_1_42
Type: CAZyme
Location: 72751 - 73953 (+)
Type: CAZyme
Location: 72751 - 73953 (+)
Gene ID: HRGMv2_4531_1_43
Type: CAZyme
Location: 74258 - 77353 (+)
Type: CAZyme
Location: 74258 - 77353 (+)
Gene ID: HRGMv2_4531_1_44
Type: TC
Location: 77428 - 79200 (-)
Type: TC
Location: 77428 - 79200 (-)
Gene ID: HRGMv2_4531_1_45
Type: TC
Location: 79190 - 80908 (-)
Type: TC
Location: 79190 - 80908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.