Cluster: HRGMv2_4531_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4531
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4531_68 | HRGMv2_4531_68_3 | 2506 | 5016 | - | 2.A.21.9.2 |
| pfam | HRGMv2_4531_68 | HRGMv2_4531_68_4 | 5013 | 5372 | - | Hpt |
| TC | HRGMv2_4531_68 | HRGMv2_4531_68_5 | 5369 | 6478 | - | 8.A.59.4.1 |
| STP | HRGMv2_4531_68 | HRGMv2_4531_68_6 | 6535 | 6945 | - | NUDIX |
| TF | HRGMv2_4531_68 | HRGMv2_4531_68_7 | 7112 | 7993 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4531_68 | HRGMv2_4531_68_8 | 8105 | 12262 | + | CBM67 | GH78 |
Gene ID: HRGMv2_4531_68_3
Type: TC
Location: 2506 - 5016 (-)
Type: TC
Location: 2506 - 5016 (-)
Gene ID: HRGMv2_4531_68_4
Type: pfam
Location: 5013 - 5372 (-)
Type: pfam
Location: 5013 - 5372 (-)
Gene ID: HRGMv2_4531_68_5
Type: TC
Location: 5369 - 6478 (-)
Type: TC
Location: 5369 - 6478 (-)
Gene ID: HRGMv2_4531_68_6
Type: STP
Location: 6535 - 6945 (-)
Type: STP
Location: 6535 - 6945 (-)
Gene ID: HRGMv2_4531_68_7
Type: TF
Location: 7112 - 7993 (+)
Type: TF
Location: 7112 - 7993 (+)
Gene ID: HRGMv2_4531_68_8
Type: CAZyme
Location: 8105 - 12262 (+)
Type: CAZyme
Location: 8105 - 12262 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.