Cluster: HRGMv2_4531_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4531
- CGC Family ID: CGCFAM_02086
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4531_30 | HRGMv2_4531_30_1 | 1 | 1440 | + | CBM13 |
| pfam | HRGMv2_4531_30 | HRGMv2_4531_30_2 | 1515 | 3002 | - | ABC2_membrane_2 | ABC2_membrane_3 | ABC2_membrane_4 |
| TC | HRGMv2_4531_30 | HRGMv2_4531_30_3 | 2995 | 3924 | - | 3.A.1.131.1 |
Gene ID: HRGMv2_4531_30_1
Type: CAZyme
Location: 1 - 1440 (+)
Type: CAZyme
Location: 1 - 1440 (+)
Gene ID: HRGMv2_4531_30_2
Type: pfam
Location: 1515 - 3002 (-)
Type: pfam
Location: 1515 - 3002 (-)
Gene ID: HRGMv2_4531_30_3
Type: TC
Location: 2995 - 3924 (-)
Type: TC
Location: 2995 - 3924 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Howiella
Species
Howiella intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.