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Cluster: HRGMv2_4531_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4531_15 HRGMv2_4531_15_2 381 2201 - 2.A.16.2.2
TC HRGMv2_4531_15 HRGMv2_4531_15_3 2432 4276 - 3.A.1.135.5
TC HRGMv2_4531_15 HRGMv2_4531_15_4 4269 6047 - 3.A.1.135.5
TF HRGMv2_4531_15 HRGMv2_4531_15_5 6061 6525 - MarR
TC HRGMv2_4531_15 HRGMv2_4531_15_6 6812 9346 - 4.C.1.1.4
pfam HRGMv2_4531_15 HRGMv2_4531_15_7 9959 12583 + Aldedh | Fe-ADH | ADH_Fe_C
TF HRGMv2_4531_15 HRGMv2_4531_15_8 12702 13553 - HTH_AraC
CAZyme HRGMv2_4531_15 HRGMv2_4531_15_9 13718 18673 + GH28
Gene ID: HRGMv2_4531_15_2
Type: TC
Location: 381 - 2201 (-)
Gene ID: HRGMv2_4531_15_3
Type: TC
Location: 2432 - 4276 (-)
Gene ID: HRGMv2_4531_15_4
Type: TC
Location: 4269 - 6047 (-)
Gene ID: HRGMv2_4531_15_5
Type: TF
Location: 6061 - 6525 (-)
Gene ID: HRGMv2_4531_15_6
Type: TC
Location: 6812 - 9346 (-)
Gene ID: HRGMv2_4531_15_7
Type: pfam
Location: 9959 - 12583 (+)
Gene ID: HRGMv2_4531_15_8
Type: TF
Location: 12702 - 13553 (-)
Gene ID: HRGMv2_4531_15_9
Type: CAZyme
Location: 13718 - 18673 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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