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Cluster: HRGMv2_4530_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4530_65 HRGMv2_4530_65_3 1971 3245 - 2.A.1.4.5
TC HRGMv2_4530_65 HRGMv2_4530_65_4 3502 4887 + 9.B.18.1.1
pfam HRGMv2_4530_65 HRGMv2_4530_65_5 5289 6497 + EpsG
CAZyme HRGMv2_4530_65 HRGMv2_4530_65_6 6514 7638 + GT4
TC HRGMv2_4530_65 HRGMv2_4530_65_7 7954 9114 + 3.A.1.4.10
TC HRGMv2_4530_65 HRGMv2_4530_65_8 9223 10104 + 3.A.1.4.10
TC HRGMv2_4530_65 HRGMv2_4530_65_9 10123 11163 + 3.A.1.4.10
TC HRGMv2_4530_65 HRGMv2_4530_65_10 11167 11928 + 3.A.1.4.10
TC HRGMv2_4530_65 HRGMv2_4530_65_11 11930 12652 + 3.A.1.4.10
TC HRGMv2_4530_65 HRGMv2_4530_65_12 13113 13904 - 2.A.102.4.4
pfam HRGMv2_4530_65 HRGMv2_4530_65_13 14052 14210 - Rubredoxin
TC HRGMv2_4530_65 HRGMv2_4530_65_14 14427 17018 + 3.A.3.2.21
Gene ID: HRGMv2_4530_65_3
Type: TC
Location: 1971 - 3245 (-)
Gene ID: HRGMv2_4530_65_4
Type: TC
Location: 3502 - 4887 (+)
Gene ID: HRGMv2_4530_65_5
Type: pfam
Location: 5289 - 6497 (+)
Gene ID: HRGMv2_4530_65_6
Type: CAZyme
Location: 6514 - 7638 (+)
Gene ID: HRGMv2_4530_65_7
Type: TC
Location: 7954 - 9114 (+)
Gene ID: HRGMv2_4530_65_8
Type: TC
Location: 9223 - 10104 (+)
Gene ID: HRGMv2_4530_65_9
Type: TC
Location: 10123 - 11163 (+)
Gene ID: HRGMv2_4530_65_10
Type: TC
Location: 11167 - 11928 (+)
Gene ID: HRGMv2_4530_65_11
Type: TC
Location: 11930 - 12652 (+)
Gene ID: HRGMv2_4530_65_12
Type: TC
Location: 13113 - 13904 (-)
Gene ID: HRGMv2_4530_65_13
Type: pfam
Location: 14052 - 14210 (-)
Gene ID: HRGMv2_4530_65_14
Type: TC
Location: 14427 - 17018 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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