Cluster: HRGMv2_4530_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_01360
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_29 | HRGMv2_4530_29_3 | 3228 | 4061 | - | 3.A.1.1.18 |
| TC | HRGMv2_4530_29 | HRGMv2_4530_29_4 | 4076 | 4954 | - | 3.A.1.1.36 |
| STP | HRGMv2_4530_29 | HRGMv2_4530_29_5 | 5109 | 6488 | - | SBP_bac_1 |
| pfam | HRGMv2_4530_29 | HRGMv2_4530_29_6 | 6519 | 7502 | - | BcrAD_BadFG |
| CAZyme | HRGMv2_4530_29 | HRGMv2_4530_29_7 | 7518 | 8777 | - | GH4 |
Gene ID: HRGMv2_4530_29_3
Type: TC
Location: 3228 - 4061 (-)
Type: TC
Location: 3228 - 4061 (-)
Gene ID: HRGMv2_4530_29_4
Type: TC
Location: 4076 - 4954 (-)
Type: TC
Location: 4076 - 4954 (-)
Gene ID: HRGMv2_4530_29_5
Type: STP
Location: 5109 - 6488 (-)
Type: STP
Location: 5109 - 6488 (-)
Gene ID: HRGMv2_4530_29_6
Type: pfam
Location: 6519 - 7502 (-)
Type: pfam
Location: 6519 - 7502 (-)
Gene ID: HRGMv2_4530_29_7
Type: CAZyme
Location: 7518 - 8777 (-)
Type: CAZyme
Location: 7518 - 8777 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.