Cluster: HRGMv2_4530_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_01700
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_328 | HRGMv2_4530_328_1 | 1 | 891 | - | 4.A.2.1.4 |
| TC | HRGMv2_4530_328 | HRGMv2_4530_328_2 | 929 | 2329 | - | 2.A.66.1.45 |
| pfam | HRGMv2_4530_328 | HRGMv2_4530_328_3 | 2331 | 2885 | - | AAA_18 |
| NULL(UNKNOWN) | HRGMv2_4530_328 | HRGMv2_4530_328_4 | 3117 | 3827 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4530_328 | HRGMv2_4530_328_5 | 4579 | 6609 | - | GH146 |
| TC | HRGMv2_4530_328 | HRGMv2_4530_328_6 | 6675 | 7520 | - | 3.A.1.1.11 |
| TC | HRGMv2_4530_328 | HRGMv2_4530_328_7 | 7522 | 8436 | - | 3.A.1.1.23 |
Gene ID: HRGMv2_4530_328_1
Type: TC
Location: 1 - 891 (-)
Type: TC
Location: 1 - 891 (-)
Gene ID: HRGMv2_4530_328_2
Type: TC
Location: 929 - 2329 (-)
Type: TC
Location: 929 - 2329 (-)
Gene ID: HRGMv2_4530_328_3
Type: pfam
Location: 2331 - 2885 (-)
Type: pfam
Location: 2331 - 2885 (-)
Gene ID: HRGMv2_4530_328_4
Type:
Location: 3117 - 3827 (-)
Type:
Location: 3117 - 3827 (-)
Gene ID: HRGMv2_4530_328_5
Type: CAZyme
Location: 4579 - 6609 (-)
Type: CAZyme
Location: 4579 - 6609 (-)
Gene ID: HRGMv2_4530_328_6
Type: TC
Location: 6675 - 7520 (-)
Type: TC
Location: 6675 - 7520 (-)
Gene ID: HRGMv2_4530_328_7
Type: TC
Location: 7522 - 8436 (-)
Type: TC
Location: 7522 - 8436 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.