Cluster: HRGMv2_4530_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4530
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_288 | HRGMv2_4530_288_3 | 3572 | 5029 | + | 3.A.1.1.7 |
| TC | HRGMv2_4530_288 | HRGMv2_4530_288_4 | 5103 | 6023 | + | 3.A.1.1.48 |
| TC | HRGMv2_4530_288 | HRGMv2_4530_288_5 | 6037 | 6876 | + | 3.A.1.1.29 |
| CAZyme | HRGMv2_4530_288 | HRGMv2_4530_288_6 | 6917 | 8026 | + | GH172 |
| pfam | HRGMv2_4530_288 | HRGMv2_4530_288_7 | 8023 | 9291 | + | DUF4185 |
| CAZyme | HRGMv2_4530_288 | HRGMv2_4530_288_8 | 9410 | 10858 | - | GH146 |
Gene ID: HRGMv2_4530_288_3
Type: TC
Location: 3572 - 5029 (+)
Type: TC
Location: 3572 - 5029 (+)
Gene ID: HRGMv2_4530_288_4
Type: TC
Location: 5103 - 6023 (+)
Type: TC
Location: 5103 - 6023 (+)
Gene ID: HRGMv2_4530_288_5
Type: TC
Location: 6037 - 6876 (+)
Type: TC
Location: 6037 - 6876 (+)
Gene ID: HRGMv2_4530_288_6
Type: CAZyme
Location: 6917 - 8026 (+)
Type: CAZyme
Location: 6917 - 8026 (+)
Gene ID: HRGMv2_4530_288_7
Type: pfam
Location: 8023 - 9291 (+)
Type: pfam
Location: 8023 - 9291 (+)
Gene ID: HRGMv2_4530_288_8
Type: CAZyme
Location: 9410 - 10858 (-)
Type: CAZyme
Location: 9410 - 10858 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.