Cluster: HRGMv2_4530_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_04508
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_227 | HRGMv2_4530_227_21 | 23206 | 24072 | - | 3.A.1.1.29 |
| TC | HRGMv2_4530_227 | HRGMv2_4530_227_22 | 24085 | 25011 | - | 3.A.1.1.10 |
| STP | HRGMv2_4530_227 | HRGMv2_4530_227_23 | 25085 | 26677 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4530_227 | HRGMv2_4530_227_24 | 27015 | 28865 | + | GH127 |
| sulfatase | HRGMv2_4530_227 | HRGMv2_4530_227_25 | 29034 | 30380 | - | S1_8 |
| TC | HRGMv2_4530_227 | HRGMv2_4530_227_26 | 30638 | 33274 | - | 4.A.2.1.17 |
Gene ID: HRGMv2_4530_227_21
Type: TC
Location: 23206 - 24072 (-)
Type: TC
Location: 23206 - 24072 (-)
Gene ID: HRGMv2_4530_227_22
Type: TC
Location: 24085 - 25011 (-)
Type: TC
Location: 24085 - 25011 (-)
Gene ID: HRGMv2_4530_227_23
Type: STP
Location: 25085 - 26677 (-)
Type: STP
Location: 25085 - 26677 (-)
Gene ID: HRGMv2_4530_227_24
Type: CAZyme
Location: 27015 - 28865 (+)
Type: CAZyme
Location: 27015 - 28865 (+)
Gene ID: HRGMv2_4530_227_25
Type: sulfatase
Location: 29034 - 30380 (-)
Type: sulfatase
Location: 29034 - 30380 (-)
Gene ID: HRGMv2_4530_227_26
Type: TC
Location: 30638 - 33274 (-)
Type: TC
Location: 30638 - 33274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.