Cluster: HRGMv2_4530_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_05323
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_196 | HRGMv2_4530_196_6 | 3601 | 5583 | + | 2.A.21.9.2 |
| NULL(UNKNOWN) | HRGMv2_4530_196 | HRGMv2_4530_196_7 | 5810 | 7153 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4530_196 | HRGMv2_4530_196_8 | 7196 | 7921 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4530_196 | HRGMv2_4530_196_9 | 8107 | 9000 | - | GH25 |
Gene ID: HRGMv2_4530_196_6
Type: TC
Location: 3601 - 5583 (+)
Type: TC
Location: 3601 - 5583 (+)
Gene ID: HRGMv2_4530_196_7
Type:
Location: 5810 - 7153 (+)
Type:
Location: 5810 - 7153 (+)
Gene ID: HRGMv2_4530_196_8
Type: pfam
Location: 7196 - 7921 (+)
Type: pfam
Location: 7196 - 7921 (+)
Gene ID: HRGMv2_4530_196_9
Type: CAZyme
Location: 8107 - 9000 (-)
Type: CAZyme
Location: 8107 - 9000 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.