Cluster: HRGMv2_4530_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4530_170 | HRGMv2_4530_170_23 | 23804 | 25834 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_4530_170 | HRGMv2_4530_170_24 | 25915 | 27138 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4530_170 | HRGMv2_4530_170_25 | 27138 | 28253 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4530_170 | HRGMv2_4530_170_26 | 28318 | 29745 | + | GT5 |
| STP | HRGMv2_4530_170 | HRGMv2_4530_170_27 | 29833 | 30213 | + | Glyoxalase |
| TC | HRGMv2_4530_170 | HRGMv2_4530_170_28 | 30414 | 31028 | + | 2.A.25.1.3 |
Gene ID: HRGMv2_4530_170_23
Type: CAZyme
Location: 23804 - 25834 (+)
Type: CAZyme
Location: 23804 - 25834 (+)
Gene ID: HRGMv2_4530_170_24
Type: pfam
Location: 25915 - 27138 (+)
Type: pfam
Location: 25915 - 27138 (+)
Gene ID: HRGMv2_4530_170_25
Type: pfam
Location: 27138 - 28253 (+)
Type: pfam
Location: 27138 - 28253 (+)
Gene ID: HRGMv2_4530_170_26
Type: CAZyme
Location: 28318 - 29745 (+)
Type: CAZyme
Location: 28318 - 29745 (+)
Gene ID: HRGMv2_4530_170_27
Type: STP
Location: 29833 - 30213 (+)
Type: STP
Location: 29833 - 30213 (+)
Gene ID: HRGMv2_4530_170_28
Type: TC
Location: 30414 - 31028 (+)
Type: TC
Location: 30414 - 31028 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.