Cluster: HRGMv2_4530_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4530
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_145 | HRGMv2_4530_145_1 | 2 | 1258 | + | 3.A.1.1.10 |
| pfam | HRGMv2_4530_145 | HRGMv2_4530_145_2 | 1467 | 2474 | + | Lactamase_B |
| CAZyme | HRGMv2_4530_145 | HRGMv2_4530_145_3 | 2507 | 3625 | + | GH172 |
| CAZyme | HRGMv2_4530_145 | HRGMv2_4530_145_4 | 3650 | 5335 | + | GH13_18 |
| CAZyme | HRGMv2_4530_145 | HRGMv2_4530_145_5 | 5332 | 6648 | + | PL25 |
Gene ID: HRGMv2_4530_145_1
Type: TC
Location: 2 - 1258 (+)
Type: TC
Location: 2 - 1258 (+)
Gene ID: HRGMv2_4530_145_2
Type: pfam
Location: 1467 - 2474 (+)
Type: pfam
Location: 1467 - 2474 (+)
Gene ID: HRGMv2_4530_145_3
Type: CAZyme
Location: 2507 - 3625 (+)
Type: CAZyme
Location: 2507 - 3625 (+)
Gene ID: HRGMv2_4530_145_4
Type: CAZyme
Location: 3650 - 5335 (+)
Type: CAZyme
Location: 3650 - 5335 (+)
Gene ID: HRGMv2_4530_145_5
Type: CAZyme
Location: 5332 - 6648 (+)
Type: CAZyme
Location: 5332 - 6648 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.