Cluster: HRGMv2_4530_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_123 | HRGMv2_4530_123_2 | 1835 | 3610 | + | 8.A.59.2.1 |
| TC | HRGMv2_4530_123 | HRGMv2_4530_123_3 | 3707 | 4648 | + | 3.A.1.1.10 |
| TC | HRGMv2_4530_123 | HRGMv2_4530_123_4 | 4652 | 5551 | + | 3.A.1.1.10 |
| STP | HRGMv2_4530_123 | HRGMv2_4530_123_5 | 5573 | 7129 | + | SBP_bac_1 |
| pfam | HRGMv2_4530_123 | HRGMv2_4530_123_6 | 7145 | 8458 | + | FAD_binding_2 | GIDA | Thi4 | FAD_oxidored |
| CAZyme | HRGMv2_4530_123 | HRGMv2_4530_123_7 | 8528 | 9577 | + | GH177 |
Gene ID: HRGMv2_4530_123_2
Type: TC
Location: 1835 - 3610 (+)
Type: TC
Location: 1835 - 3610 (+)
Gene ID: HRGMv2_4530_123_3
Type: TC
Location: 3707 - 4648 (+)
Type: TC
Location: 3707 - 4648 (+)
Gene ID: HRGMv2_4530_123_4
Type: TC
Location: 4652 - 5551 (+)
Type: TC
Location: 4652 - 5551 (+)
Gene ID: HRGMv2_4530_123_5
Type: STP
Location: 5573 - 7129 (+)
Type: STP
Location: 5573 - 7129 (+)
Gene ID: HRGMv2_4530_123_6
Type: pfam
Location: 7145 - 8458 (+)
Type: pfam
Location: 7145 - 8458 (+)
Gene ID: HRGMv2_4530_123_7
Type: CAZyme
Location: 8528 - 9577 (+)
Type: CAZyme
Location: 8528 - 9577 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.