Cluster: HRGMv2_4530_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4530
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_101 | HRGMv2_4530_101_1 | 61 | 903 | - | 3.A.1.1.45 |
| TC | HRGMv2_4530_101 | HRGMv2_4530_101_2 | 903 | 1772 | - | 3.A.1.1.45 |
| STP | HRGMv2_4530_101 | HRGMv2_4530_101_3 | 1887 | 3185 | - | SBP_bac_1 |
| TF | HRGMv2_4530_101 | HRGMv2_4530_101_4 | 3507 | 4487 | - | LacI |
| CAZyme | HRGMv2_4530_101 | HRGMv2_4530_101_5 | 4583 | 5686 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_4530_101 | HRGMv2_4530_101_6 | 6197 | 6676 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4530_101 | HRGMv2_4530_101_7 | 6800 | 7417 | + | 9.B.31.1.1 |
| CAZyme | HRGMv2_4530_101 | HRGMv2_4530_101_8 | 7405 | 8562 | + | GT28 |
Gene ID: HRGMv2_4530_101_1
Type: TC
Location: 61 - 903 (-)
Type: TC
Location: 61 - 903 (-)
Gene ID: HRGMv2_4530_101_2
Type: TC
Location: 903 - 1772 (-)
Type: TC
Location: 903 - 1772 (-)
Gene ID: HRGMv2_4530_101_3
Type: STP
Location: 1887 - 3185 (-)
Type: STP
Location: 1887 - 3185 (-)
Gene ID: HRGMv2_4530_101_4
Type: TF
Location: 3507 - 4487 (-)
Type: TF
Location: 3507 - 4487 (-)
Gene ID: HRGMv2_4530_101_5
Type: CAZyme
Location: 4583 - 5686 (-)
Type: CAZyme
Location: 4583 - 5686 (-)
Gene ID: HRGMv2_4530_101_6
Type:
Location: 6197 - 6676 (+)
Type:
Location: 6197 - 6676 (+)
Gene ID: HRGMv2_4530_101_7
Type: TC
Location: 6800 - 7417 (+)
Type: TC
Location: 6800 - 7417 (+)
Gene ID: HRGMv2_4530_101_8
Type: CAZyme
Location: 7405 - 8562 (+)
Type: CAZyme
Location: 7405 - 8562 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.