Cluster: HRGMv2_4530_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_10255
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4530_94 | HRGMv2_4530_94_3 | 3351 | 4886 | + | GH32 |
| pfam | HRGMv2_4530_94 | HRGMv2_4530_94_4 | 4999 | 5313 | + | Thioredoxin | Thioredoxin_2 | Thioredoxin_3 | Thioredoxin_9 |
| TC | HRGMv2_4530_94 | HRGMv2_4530_94_5 | 5426 | 6106 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_4530_94_3
Type: CAZyme
Location: 3351 - 4886 (+)
Type: CAZyme
Location: 3351 - 4886 (+)
Gene ID: HRGMv2_4530_94_4
Type: pfam
Location: 4999 - 5313 (+)
Type: pfam
Location: 4999 - 5313 (+)
Gene ID: HRGMv2_4530_94_5
Type: TC
Location: 5426 - 6106 (-)
Type: TC
Location: 5426 - 6106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.