Cluster: HRGMv2_4530_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_03268
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4530_84 | HRGMv2_4530_84_3 | 2734 | 3657 | + | 3.A.1.1.10 |
| TC | HRGMv2_4530_84 | HRGMv2_4530_84_4 | 3674 | 4552 | + | 3.A.1.1.10 |
| TC | HRGMv2_4530_84 | HRGMv2_4530_84_5 | 4587 | 6179 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_4530_84 | HRGMv2_4530_84_6 | 6297 | 7205 | + | GH43_11 |
Gene ID: HRGMv2_4530_84_3
Type: TC
Location: 2734 - 3657 (+)
Type: TC
Location: 2734 - 3657 (+)
Gene ID: HRGMv2_4530_84_4
Type: TC
Location: 3674 - 4552 (+)
Type: TC
Location: 3674 - 4552 (+)
Gene ID: HRGMv2_4530_84_5
Type: TC
Location: 4587 - 6179 (+)
Type: TC
Location: 4587 - 6179 (+)
Gene ID: HRGMv2_4530_84_6
Type: CAZyme
Location: 6297 - 7205 (+)
Type: CAZyme
Location: 6297 - 7205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.