Cluster: HRGMv2_4530_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_4530
- CGC Family ID: CGCFAM_00083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4530_83 | HRGMv2_4530_83_1 | 2 | 1183 | - | GH2 |
| TF | HRGMv2_4530_83 | HRGMv2_4530_83_2 | 1318 | 2142 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_4530_83 | HRGMv2_4530_83_3 | 2271 | 3500 | + | 2.A.86.1.5 |
Gene ID: HRGMv2_4530_83_1
Type: CAZyme
Location: 2 - 1183 (-)
Type: CAZyme
Location: 2 - 1183 (-)
Gene ID: HRGMv2_4530_83_2
Type: TF
Location: 1318 - 2142 (+)
Type: TF
Location: 1318 - 2142 (+)
Gene ID: HRGMv2_4530_83_3
Type: TC
Location: 2271 - 3500 (+)
Type: TC
Location: 2271 - 3500 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Caccousia
Species
Caccousia avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.