Cluster: HRGMv2_4529_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_4529
- CGC Family ID: CGCFAM_00083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4529_9 | HRGMv2_4529_9_39 | 47415 | 49172 | - | GH2 |
| TF | HRGMv2_4529_9 | HRGMv2_4529_9_40 | 49280 | 50122 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_4529_9 | HRGMv2_4529_9_41 | 50955 | 51077 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4529_9 | HRGMv2_4529_9_42 | 51128 | 52717 | - | 2.A.40.1.4 |
Gene ID: HRGMv2_4529_9_39
Type: CAZyme
Location: 47415 - 49172 (-)
Type: CAZyme
Location: 47415 - 49172 (-)
Gene ID: HRGMv2_4529_9_40
Type: TF
Location: 49280 - 50122 (+)
Type: TF
Location: 49280 - 50122 (+)
Gene ID: HRGMv2_4529_9_41
Type:
Location: 50955 - 51077 (+)
Type:
Location: 50955 - 51077 (+)
Gene ID: HRGMv2_4529_9_42
Type: TC
Location: 51128 - 52717 (-)
Type: TC
Location: 51128 - 52717 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.