Cluster: HRGMv2_4529_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4529
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_6 | HRGMv2_4529_6_22 | 24327 | 26036 | + | 4.C.1.1.4 |
| pfam | HRGMv2_4529_6 | HRGMv2_4529_6_23 | 26058 | 27560 | + | IMPDH | CBS | CBS |
| pfam | HRGMv2_4529_6 | HRGMv2_4529_6_24 | 27588 | 28346 | + | Acyl-ACP_TE_C |
| CAZyme | HRGMv2_4529_6 | HRGMv2_4529_6_25 | 28373 | 29926 | + | GH16_3 |
| NULL(UNKNOWN) | HRGMv2_4529_6 | HRGMv2_4529_6_26 | 30018 | 30239 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4529_6 | HRGMv2_4529_6_27 | 30518 | 32086 | + | GH16_3 |
Gene ID: HRGMv2_4529_6_22
Type: TC
Location: 24327 - 26036 (+)
Type: TC
Location: 24327 - 26036 (+)
Gene ID: HRGMv2_4529_6_23
Type: pfam
Location: 26058 - 27560 (+)
Type: pfam
Location: 26058 - 27560 (+)
Gene ID: HRGMv2_4529_6_24
Type: pfam
Location: 27588 - 28346 (+)
Type: pfam
Location: 27588 - 28346 (+)
Gene ID: HRGMv2_4529_6_25
Type: CAZyme
Location: 28373 - 29926 (+)
Type: CAZyme
Location: 28373 - 29926 (+)
Gene ID: HRGMv2_4529_6_26
Type:
Location: 30018 - 30239 (-)
Type:
Location: 30018 - 30239 (-)
Gene ID: HRGMv2_4529_6_27
Type: CAZyme
Location: 30518 - 32086 (+)
Type: CAZyme
Location: 30518 - 32086 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.