Cluster: HRGMv2_4529_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4529
- CGC Family ID: CGCFAM_00619
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_59 | HRGMv2_4529_59_2 | 508 | 1629 | + | 3.A.1.11.8 |
| TC | HRGMv2_4529_59 | HRGMv2_4529_59_3 | 1619 | 2539 | + | 3.A.1.11.8 |
| TC | HRGMv2_4529_59 | HRGMv2_4529_59_4 | 2540 | 3364 | + | 3.A.1.11.7 |
| TC | HRGMv2_4529_59 | HRGMv2_4529_59_5 | 3361 | 4596 | + | 3.A.1.11.7 |
| CAZyme | HRGMv2_4529_59 | HRGMv2_4529_59_6 | 4659 | 6806 | - | GH141 |
Gene ID: HRGMv2_4529_59_2
Type: TC
Location: 508 - 1629 (+)
Type: TC
Location: 508 - 1629 (+)
Gene ID: HRGMv2_4529_59_3
Type: TC
Location: 1619 - 2539 (+)
Type: TC
Location: 1619 - 2539 (+)
Gene ID: HRGMv2_4529_59_4
Type: TC
Location: 2540 - 3364 (+)
Type: TC
Location: 2540 - 3364 (+)
Gene ID: HRGMv2_4529_59_5
Type: TC
Location: 3361 - 4596 (+)
Type: TC
Location: 3361 - 4596 (+)
Gene ID: HRGMv2_4529_59_6
Type: CAZyme
Location: 4659 - 6806 (-)
Type: CAZyme
Location: 4659 - 6806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.