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Cluster: HRGMv2_4529_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4529_44 HRGMv2_4529_44_2 1295 2758 - CE4
CAZyme HRGMv2_4529_44 HRGMv2_4529_44_3 3201 5354 + GH5_2
CAZyme HRGMv2_4529_44 HRGMv2_4529_44_4 5425 6978 + GH32
STP HRGMv2_4529_44 HRGMv2_4529_44_5 7437 8084 + TetR_N
TC HRGMv2_4529_44 HRGMv2_4529_44_6 8165 8644 + 3.A.1.147.6
TC HRGMv2_4529_44 HRGMv2_4529_44_7 8703 8882 + 3.A.1.147.6
TC HRGMv2_4529_44 HRGMv2_4529_44_8 8879 10483 + 3.A.1.147.6
TC HRGMv2_4529_44 HRGMv2_4529_44_9 10667 11581 + 3.A.1.105.3
Gene ID: HRGMv2_4529_44_2
Type: CAZyme
Location: 1295 - 2758 (-)
Gene ID: HRGMv2_4529_44_3
Type: CAZyme
Location: 3201 - 5354 (+)
Gene ID: HRGMv2_4529_44_4
Type: CAZyme
Location: 5425 - 6978 (+)
Gene ID: HRGMv2_4529_44_5
Type: STP
Location: 7437 - 8084 (+)
Gene ID: HRGMv2_4529_44_6
Type: TC
Location: 8165 - 8644 (+)
Gene ID: HRGMv2_4529_44_7
Type: TC
Location: 8703 - 8882 (+)
Gene ID: HRGMv2_4529_44_8
Type: TC
Location: 8879 - 10483 (+)
Gene ID: HRGMv2_4529_44_9
Type: TC
Location: 10667 - 11581 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
HGM12669
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4529_44_7 vegetarian > vegan 1.11748 0.00364

🧭 Explore Read Mapping of CGC

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