Cluster: HRGMv2_4529_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4529
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_36 | HRGMv2_4529_36_5 | 4430 | 6484 | - | 3.A.1.5.1 |
| pfam | HRGMv2_4529_36 | HRGMv2_4529_36_6 | 6651 | 7481 | - | Fumble |
| NULL(UNKNOWN) | HRGMv2_4529_36 | HRGMv2_4529_36_7 | 7593 | 8240 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4529_36 | HRGMv2_4529_36_8 | 8308 | 10593 | - | GH31 |
| CAZyme | HRGMv2_4529_36 | HRGMv2_4529_36_9 | 10642 | 12063 | - | GH110 |
Gene ID: HRGMv2_4529_36_5
Type: TC
Location: 4430 - 6484 (-)
Type: TC
Location: 4430 - 6484 (-)
Gene ID: HRGMv2_4529_36_6
Type: pfam
Location: 6651 - 7481 (-)
Type: pfam
Location: 6651 - 7481 (-)
Gene ID: HRGMv2_4529_36_7
Type:
Location: 7593 - 8240 (-)
Type:
Location: 7593 - 8240 (-)
Gene ID: HRGMv2_4529_36_8
Type: CAZyme
Location: 8308 - 10593 (-)
Type: CAZyme
Location: 8308 - 10593 (-)
Gene ID: HRGMv2_4529_36_9
Type: CAZyme
Location: 10642 - 12063 (-)
Type: CAZyme
Location: 10642 - 12063 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.