Cluster: HRGMv2_4529_CGC2
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_4529
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_1 | HRGMv2_4529_1_37 | 44327 | 45598 | - | 3.A.1.103.5 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_38 | 45641 | 46876 | - | GT4 |
| TC | HRGMv2_4529_1 | HRGMv2_4529_1_39 | 46878 | 47759 | - | 3.A.1.103.5 |
| pfam | HRGMv2_4529_1 | HRGMv2_4529_1_40 | 47835 | 49439 | - | Asn_synthase | GATase_7 |
| pfam | HRGMv2_4529_1 | HRGMv2_4529_1_41 | 49452 | 50084 | - | DUF1919 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_42 | 50095 | 51135 | - | GT2 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_43 | 51154 | 52113 | - | GT2 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_44 | 52132 | 53127 | - | GT2 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_45 | 53124 | 54125 | - | GT2 |
| TC | HRGMv2_4529_1 | HRGMv2_4529_1_46 | 54128 | 55315 | - | 9.B.183.1.9 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_47 | 55343 | 56470 | - | GT4 |
| pfam | HRGMv2_4529_1 | HRGMv2_4529_1_48 | 56480 | 57415 | - | ATPgrasp_TupA |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_49 | 57422 | 58288 | - | GT2 |
| CAZyme | HRGMv2_4529_1 | HRGMv2_4529_1_50 | 58293 | 59399 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_4529_1 | HRGMv2_4529_1_51 | 59396 | 60385 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4529_1 | HRGMv2_4529_1_52 | 60382 | 61071 | - | WbqC |
| TC | HRGMv2_4529_1 | HRGMv2_4529_1_53 | 61068 | 61727 | - | 9.B.18.1.1 |
Gene ID: HRGMv2_4529_1_37
Type: TC
Location: 44327 - 45598 (-)
Type: TC
Location: 44327 - 45598 (-)
Gene ID: HRGMv2_4529_1_38
Type: CAZyme
Location: 45641 - 46876 (-)
Type: CAZyme
Location: 45641 - 46876 (-)
Gene ID: HRGMv2_4529_1_39
Type: TC
Location: 46878 - 47759 (-)
Type: TC
Location: 46878 - 47759 (-)
Gene ID: HRGMv2_4529_1_40
Type: pfam
Location: 47835 - 49439 (-)
Type: pfam
Location: 47835 - 49439 (-)
Gene ID: HRGMv2_4529_1_41
Type: pfam
Location: 49452 - 50084 (-)
Type: pfam
Location: 49452 - 50084 (-)
Gene ID: HRGMv2_4529_1_42
Type: CAZyme
Location: 50095 - 51135 (-)
Type: CAZyme
Location: 50095 - 51135 (-)
Gene ID: HRGMv2_4529_1_43
Type: CAZyme
Location: 51154 - 52113 (-)
Type: CAZyme
Location: 51154 - 52113 (-)
Gene ID: HRGMv2_4529_1_44
Type: CAZyme
Location: 52132 - 53127 (-)
Type: CAZyme
Location: 52132 - 53127 (-)
Gene ID: HRGMv2_4529_1_45
Type: CAZyme
Location: 53124 - 54125 (-)
Type: CAZyme
Location: 53124 - 54125 (-)
Gene ID: HRGMv2_4529_1_46
Type: TC
Location: 54128 - 55315 (-)
Type: TC
Location: 54128 - 55315 (-)
Gene ID: HRGMv2_4529_1_47
Type: CAZyme
Location: 55343 - 56470 (-)
Type: CAZyme
Location: 55343 - 56470 (-)
Gene ID: HRGMv2_4529_1_48
Type: pfam
Location: 56480 - 57415 (-)
Type: pfam
Location: 56480 - 57415 (-)
Gene ID: HRGMv2_4529_1_49
Type: CAZyme
Location: 57422 - 58288 (-)
Type: CAZyme
Location: 57422 - 58288 (-)
Gene ID: HRGMv2_4529_1_50
Type: CAZyme
Location: 58293 - 59399 (-)
Type: CAZyme
Location: 58293 - 59399 (-)
Gene ID: HRGMv2_4529_1_51
Type:
Location: 59396 - 60385 (-)
Type:
Location: 59396 - 60385 (-)
Gene ID: HRGMv2_4529_1_52
Type: pfam
Location: 60382 - 61071 (-)
Type: pfam
Location: 60382 - 61071 (-)
Gene ID: HRGMv2_4529_1_53
Type: TC
Location: 61068 - 61727 (-)
Type: TC
Location: 61068 - 61727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.