Cluster: HRGMv2_4529_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4529
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_34 | HRGMv2_4529_34_3 | 1620 | 4436 | + | 3.A.1.122.2 |
| pfam | HRGMv2_4529_34 | HRGMv2_4529_34_4 | 4635 | 5696 | - | NAD_synthase | ThiI | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M |
| TF | HRGMv2_4529_34 | HRGMv2_4529_34_5 | 5894 | 6676 | - | 0043707 |
| CAZyme | HRGMv2_4529_34 | HRGMv2_4529_34_6 | 6773 | 10342 | - | GT84 |
| NULL(UNKNOWN) | HRGMv2_4529_34 | HRGMv2_4529_34_7 | 10414 | 10998 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4529_34 | HRGMv2_4529_34_8 | 10982 | 12769 | - | 3.A.11.1.1 |
Gene ID: HRGMv2_4529_34_3
Type: TC
Location: 1620 - 4436 (+)
Type: TC
Location: 1620 - 4436 (+)
Gene ID: HRGMv2_4529_34_4
Type: pfam
Location: 4635 - 5696 (-)
Type: pfam
Location: 4635 - 5696 (-)
Gene ID: HRGMv2_4529_34_5
Type: TF
Location: 5894 - 6676 (-)
Type: TF
Location: 5894 - 6676 (-)
Gene ID: HRGMv2_4529_34_6
Type: CAZyme
Location: 6773 - 10342 (-)
Type: CAZyme
Location: 6773 - 10342 (-)
Gene ID: HRGMv2_4529_34_7
Type:
Location: 10414 - 10998 (-)
Type:
Location: 10414 - 10998 (-)
Gene ID: HRGMv2_4529_34_8
Type: TC
Location: 10982 - 12769 (-)
Type: TC
Location: 10982 - 12769 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.