Cluster: HRGMv2_4529_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4529
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_32 | HRGMv2_4529_32_15 | 13146 | 14228 | + | 9.B.67.1.1 |
| pfam | HRGMv2_4529_32 | HRGMv2_4529_32_16 | 14262 | 14774 | + | DUF4330 |
| pfam | HRGMv2_4529_32 | HRGMv2_4529_32_17 | 14771 | 15367 | + | DUF4330 |
| TC | HRGMv2_4529_32 | HRGMv2_4529_32_18 | 15348 | 16235 | + | 2.A.119.2.2 |
| pfam | HRGMv2_4529_32 | HRGMv2_4529_32_19 | 16293 | 17018 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_4529_32 | HRGMv2_4529_32_20 | 17145 | 18449 | + | GH25 |
Gene ID: HRGMv2_4529_32_15
Type: TC
Location: 13146 - 14228 (+)
Type: TC
Location: 13146 - 14228 (+)
Gene ID: HRGMv2_4529_32_16
Type: pfam
Location: 14262 - 14774 (+)
Type: pfam
Location: 14262 - 14774 (+)
Gene ID: HRGMv2_4529_32_17
Type: pfam
Location: 14771 - 15367 (+)
Type: pfam
Location: 14771 - 15367 (+)
Gene ID: HRGMv2_4529_32_18
Type: TC
Location: 15348 - 16235 (+)
Type: TC
Location: 15348 - 16235 (+)
Gene ID: HRGMv2_4529_32_19
Type: pfam
Location: 16293 - 17018 (+)
Type: pfam
Location: 16293 - 17018 (+)
Gene ID: HRGMv2_4529_32_20
Type: CAZyme
Location: 17145 - 18449 (+)
Type: CAZyme
Location: 17145 - 18449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.