Cluster: HRGMv2_4529_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4529
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4529_21 | HRGMv2_4529_21_2 | 2499 | 3182 | + | 1.C.113.1.3 |
| pfam | HRGMv2_4529_21 | HRGMv2_4529_21_3 | 3226 | 4077 | + | Amidase_3 |
| pfam | HRGMv2_4529_21 | HRGMv2_4529_21_4 | 4263 | 4463 | + | DUF1858 |
| CAZyme | HRGMv2_4529_21 | HRGMv2_4529_21_5 | 4626 | 5753 | - | GH27 |
| TC | HRGMv2_4529_21 | HRGMv2_4529_21_6 | 5941 | 6828 | - | 8.A.5.1.4 |
| pfam | HRGMv2_4529_21 | HRGMv2_4529_21_7 | 6982 | 7752 | + | Hydrolase_3 |
| TC | HRGMv2_4529_21 | HRGMv2_4529_21_8 | 7758 | 8084 | - | 2.A.78.1.1 |
| TC | HRGMv2_4529_21 | HRGMv2_4529_21_9 | 8081 | 8824 | - | 2.A.78.1.1 |
Gene ID: HRGMv2_4529_21_2
Type: TC
Location: 2499 - 3182 (+)
Type: TC
Location: 2499 - 3182 (+)
Gene ID: HRGMv2_4529_21_3
Type: pfam
Location: 3226 - 4077 (+)
Type: pfam
Location: 3226 - 4077 (+)
Gene ID: HRGMv2_4529_21_4
Type: pfam
Location: 4263 - 4463 (+)
Type: pfam
Location: 4263 - 4463 (+)
Gene ID: HRGMv2_4529_21_5
Type: CAZyme
Location: 4626 - 5753 (-)
Type: CAZyme
Location: 4626 - 5753 (-)
Gene ID: HRGMv2_4529_21_6
Type: TC
Location: 5941 - 6828 (-)
Type: TC
Location: 5941 - 6828 (-)
Gene ID: HRGMv2_4529_21_7
Type: pfam
Location: 6982 - 7752 (+)
Type: pfam
Location: 6982 - 7752 (+)
Gene ID: HRGMv2_4529_21_8
Type: TC
Location: 7758 - 8084 (-)
Type: TC
Location: 7758 - 8084 (-)
Gene ID: HRGMv2_4529_21_9
Type: TC
Location: 8081 - 8824 (-)
Type: TC
Location: 8081 - 8824 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
HGM12669
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.