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Cluster: HRGMv2_4529_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4529_16 HRGMv2_4529_16_3 1602 2156 - 3.A.1.25.5
pfam HRGMv2_4529_16 HRGMv2_4529_16_4 2199 4412 - Gly_radical | PFL-like
STP HRGMv2_4529_16 HRGMv2_4529_16_5 4778 5335 + Pribosyltran
CAZyme HRGMv2_4529_16 HRGMv2_4529_16_6 5424 7622 + GH36
STP HRGMv2_4529_16 HRGMv2_4529_16_7 7640 8305 + HD
TC HRGMv2_4529_16 HRGMv2_4529_16_8 8535 10292 + 2.A.58.2.2
pfam HRGMv2_4529_16 HRGMv2_4529_16_9 10507 11433 + PBP_like | PBP_like_2 | PBP_like_2
TC HRGMv2_4529_16 HRGMv2_4529_16_10 11437 12369 + 3.A.1.7.5
TC HRGMv2_4529_16 HRGMv2_4529_16_11 12366 13232 + 3.A.1.7.5
TC HRGMv2_4529_16 HRGMv2_4529_16_12 13229 13978 + 3.A.1.7.5
Gene ID: HRGMv2_4529_16_3
Type: TC
Location: 1602 - 2156 (-)
Gene ID: HRGMv2_4529_16_4
Type: pfam
Location: 2199 - 4412 (-)
Gene ID: HRGMv2_4529_16_5
Type: STP
Location: 4778 - 5335 (+)
Gene ID: HRGMv2_4529_16_6
Type: CAZyme
Location: 5424 - 7622 (+)
Gene ID: HRGMv2_4529_16_7
Type: STP
Location: 7640 - 8305 (+)
Gene ID: HRGMv2_4529_16_8
Type: TC
Location: 8535 - 10292 (+)
Gene ID: HRGMv2_4529_16_9
Type: pfam
Location: 10507 - 11433 (+)
Gene ID: HRGMv2_4529_16_10
Type: TC
Location: 11437 - 12369 (+)
Gene ID: HRGMv2_4529_16_11
Type: TC
Location: 12366 - 13232 (+)
Gene ID: HRGMv2_4529_16_12
Type: TC
Location: 13229 - 13978 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
HGM12669
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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