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Cluster: HRGMv2_4529_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4529_15 HRGMv2_4529_15_2 873 2600 - 2.A.35.2.1
TF HRGMv2_4529_15 HRGMv2_4529_15_3 3159 3581 + HTH_5
TC HRGMv2_4529_15 HRGMv2_4529_15_4 3582 5579 + 3.A.3.6.5
NULL(UNKNOWN) HRGMv2_4529_15 HRGMv2_4529_15_5 5686 6210 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4529_15 HRGMv2_4529_15_6 6433 7926 + PLDc | PLDc_2 | PLDc_2 | PLDc_N
TC HRGMv2_4529_15 HRGMv2_4529_15_7 8021 8749 + 9.B.31.1.2
pfam HRGMv2_4529_15 HRGMv2_4529_15_8 8794 9681 + DegV
pfam HRGMv2_4529_15 HRGMv2_4529_15_9 9740 11491 + Dak2 | FakA-like_C | FakA-like_M
CAZyme HRGMv2_4529_15 HRGMv2_4529_15_10 11796 13685 + GH165
Gene ID: HRGMv2_4529_15_2
Type: TC
Location: 873 - 2600 (-)
Gene ID: HRGMv2_4529_15_3
Type: TF
Location: 3159 - 3581 (+)
Gene ID: HRGMv2_4529_15_4
Type: TC
Location: 3582 - 5579 (+)
Gene ID: HRGMv2_4529_15_5
Type:
Location: 5686 - 6210 (+)
Gene ID: HRGMv2_4529_15_6
Type: pfam
Location: 6433 - 7926 (+)
Gene ID: HRGMv2_4529_15_7
Type: TC
Location: 8021 - 8749 (+)
Gene ID: HRGMv2_4529_15_8
Type: pfam
Location: 8794 - 9681 (+)
Gene ID: HRGMv2_4529_15_9
Type: pfam
Location: 9740 - 11491 (+)
Gene ID: HRGMv2_4529_15_10
Type: CAZyme
Location: 11796 - 13685 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
HGM12669
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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