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Cluster: HRGMv2_4528_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4528_82 HRGMv2_4528_82_2 2717 3847 + 2.A.45.2.6
TC HRGMv2_4528_82 HRGMv2_4528_82_3 3876 6407 - 3.A.3.5.15
pfam HRGMv2_4528_82 HRGMv2_4528_82_4 6456 6782 - Trns_repr_metal
CAZyme HRGMv2_4528_82 HRGMv2_4528_82_5 6948 8024 - GT2
pfam HRGMv2_4528_82 HRGMv2_4528_82_6 8087 9385 - Collagen | Collagen | BclA_C
STP HRGMv2_4528_82 HRGMv2_4528_82_7 9528 11567 - Fer4 | Pyr_redox_2
TC HRGMv2_4528_82 HRGMv2_4528_82_8 11581 13332 - 3.D.1.5.1
TC HRGMv2_4528_82 HRGMv2_4528_82_9 13329 13835 - 3.D.1.5.1
TC HRGMv2_4528_82 HRGMv2_4528_82_10 14175 15665 + 1.I.1.1.3
Gene ID: HRGMv2_4528_82_2
Type: TC
Location: 2717 - 3847 (+)
Gene ID: HRGMv2_4528_82_3
Type: TC
Location: 3876 - 6407 (-)
Gene ID: HRGMv2_4528_82_4
Type: pfam
Location: 6456 - 6782 (-)
Gene ID: HRGMv2_4528_82_5
Type: CAZyme
Location: 6948 - 8024 (-)
Gene ID: HRGMv2_4528_82_6
Type: pfam
Location: 8087 - 9385 (-)
Gene ID: HRGMv2_4528_82_7
Type: STP
Location: 9528 - 11567 (-)
Gene ID: HRGMv2_4528_82_8
Type: TC
Location: 11581 - 13332 (-)
Gene ID: HRGMv2_4528_82_9
Type: TC
Location: 13329 - 13835 (-)
Gene ID: HRGMv2_4528_82_10
Type: TC
Location: 14175 - 15665 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
CAKTFW01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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