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Cluster: HRGMv2_4528_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4528_78 HRGMv2_4528_78_30 32331 34184 - CE4
TC HRGMv2_4528_78 HRGMv2_4528_78_31 34198 35745 - 2.A.50.2.1
pfam HRGMv2_4528_78 HRGMv2_4528_78_32 35749 35970 - PP-binding
pfam HRGMv2_4528_78 HRGMv2_4528_78_33 35963 36772 - Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_4528_78 HRGMv2_4528_78_34 36759 38285 - 4.C.1.1.7
TF HRGMv2_4528_78 HRGMv2_4528_78_35 38413 38769 - HTH_3
sulfatase HRGMv2_4528_78 HRGMv2_4528_78_36 38938 42783 + S1_7
TC HRGMv2_4528_78 HRGMv2_4528_78_37 42834 44312 - 2.A.86.1.8
Gene ID: HRGMv2_4528_78_30
Type: CAZyme
Location: 32331 - 34184 (-)
Gene ID: HRGMv2_4528_78_31
Type: TC
Location: 34198 - 35745 (-)
Gene ID: HRGMv2_4528_78_32
Type: pfam
Location: 35749 - 35970 (-)
Gene ID: HRGMv2_4528_78_33
Type: pfam
Location: 35963 - 36772 (-)
Gene ID: HRGMv2_4528_78_34
Type: TC
Location: 36759 - 38285 (-)
Gene ID: HRGMv2_4528_78_35
Type: TF
Location: 38413 - 38769 (-)
Gene ID: HRGMv2_4528_78_36
Type: sulfatase
Location: 38938 - 42783 (+)
Gene ID: HRGMv2_4528_78_37
Type: TC
Location: 42834 - 44312 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
CAKTFW01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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