Cluster: HRGMv2_4528_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4528
- CGC Family ID: CGCFAM_02940
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4528_68 | HRGMv2_4528_68_21 | 18119 | 19489 | - | 2.A.66.1.32 |
| TF | HRGMv2_4528_68 | HRGMv2_4528_68_22 | 19492 | 19929 | - | MarR |
| TC | HRGMv2_4528_68 | HRGMv2_4528_68_23 | 20772 | 21551 | + | 2.A.5.5.2 |
| pfam | HRGMv2_4528_68 | HRGMv2_4528_68_24 | 21548 | 21943 | + | Zn_Ribbon_1 |
| CAZyme | HRGMv2_4528_68 | HRGMv2_4528_68_25 | 21940 | 23169 | + | GH3 |
Gene ID: HRGMv2_4528_68_21
Type: TC
Location: 18119 - 19489 (-)
Type: TC
Location: 18119 - 19489 (-)
Gene ID: HRGMv2_4528_68_22
Type: TF
Location: 19492 - 19929 (-)
Type: TF
Location: 19492 - 19929 (-)
Gene ID: HRGMv2_4528_68_23
Type: TC
Location: 20772 - 21551 (+)
Type: TC
Location: 20772 - 21551 (+)
Gene ID: HRGMv2_4528_68_24
Type: pfam
Location: 21548 - 21943 (+)
Type: pfam
Location: 21548 - 21943 (+)
Gene ID: HRGMv2_4528_68_25
Type: CAZyme
Location: 21940 - 23169 (+)
Type: CAZyme
Location: 21940 - 23169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAKTFW01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.