dbCAN Logo

Cluster: HRGMv2_4528_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4528_55 HRGMv2_4528_55_2 176 2473 - 3.A.9.1.2
pfam HRGMv2_4528_55 HRGMv2_4528_55_3 2570 3721 - DUF5711
pfam HRGMv2_4528_55 HRGMv2_4528_55_4 3711 4475 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_4528_55 HRGMv2_4528_55_5 4488 5291 - 3.A.1.25.4
TC HRGMv2_4528_55 HRGMv2_4528_55_6 5284 6150 - 3.A.1.25.6
TC HRGMv2_4528_55 HRGMv2_4528_55_7 6176 7054 - 3.A.1.26.7
pfam HRGMv2_4528_55 HRGMv2_4528_55_8 7051 7911 - Cons_hypoth95 | Methyltransf_15 | Methyltrans_SAM
CAZyme HRGMv2_4528_55 HRGMv2_4528_55_9 7933 10425 - GT51
Gene ID: HRGMv2_4528_55_2
Type: TC
Location: 176 - 2473 (-)
Gene ID: HRGMv2_4528_55_3
Type: pfam
Location: 2570 - 3721 (-)
Gene ID: HRGMv2_4528_55_4
Type: pfam
Location: 3711 - 4475 (-)
Gene ID: HRGMv2_4528_55_5
Type: TC
Location: 4488 - 5291 (-)
Gene ID: HRGMv2_4528_55_6
Type: TC
Location: 5284 - 6150 (-)
Gene ID: HRGMv2_4528_55_7
Type: TC
Location: 6176 - 7054 (-)
Gene ID: HRGMv2_4528_55_8
Type: pfam
Location: 7051 - 7911 (-)
Gene ID: HRGMv2_4528_55_9
Type: CAZyme
Location: 7933 - 10425 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
CAKTFW01
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4528_55_3 vegetarian > vegan 1.02673 0.01287

🧭 Explore Read Mapping of CGC

← Back to Cluster List