Cluster: HRGMv2_4528_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4528
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4528_31 | HRGMv2_4528_31_56 | 46696 | 47733 | - | GH25 |
| pfam | HRGMv2_4528_31 | HRGMv2_4528_31_57 | 47905 | 49308 | - | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| TC | HRGMv2_4528_31 | HRGMv2_4528_31_58 | 49345 | 49911 | - | 4.F.1.1.7 |
| pfam | HRGMv2_4528_31 | HRGMv2_4528_31_59 | 50322 | 51074 | + | 5-FTHF_cyc-lig |
| TC | HRGMv2_4528_31 | HRGMv2_4528_31_60 | 51117 | 52643 | + | 3.A.1.2.12 |
| TC | HRGMv2_4528_31 | HRGMv2_4528_31_61 | 52630 | 53742 | + | 3.A.1.2.10 |
| TC | HRGMv2_4528_31 | HRGMv2_4528_31_62 | 53739 | 54680 | + | 3.A.1.2.18 |
Gene ID: HRGMv2_4528_31_56
Type: CAZyme
Location: 46696 - 47733 (-)
Type: CAZyme
Location: 46696 - 47733 (-)
Gene ID: HRGMv2_4528_31_57
Type: pfam
Location: 47905 - 49308 (-)
Type: pfam
Location: 47905 - 49308 (-)
Gene ID: HRGMv2_4528_31_58
Type: TC
Location: 49345 - 49911 (-)
Type: TC
Location: 49345 - 49911 (-)
Gene ID: HRGMv2_4528_31_59
Type: pfam
Location: 50322 - 51074 (+)
Type: pfam
Location: 50322 - 51074 (+)
Gene ID: HRGMv2_4528_31_60
Type: TC
Location: 51117 - 52643 (+)
Type: TC
Location: 51117 - 52643 (+)
Gene ID: HRGMv2_4528_31_61
Type: TC
Location: 52630 - 53742 (+)
Type: TC
Location: 52630 - 53742 (+)
Gene ID: HRGMv2_4528_31_62
Type: TC
Location: 53739 - 54680 (+)
Type: TC
Location: 53739 - 54680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAKTFW01
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.