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Cluster: HRGMv2_4527_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4527_8 HRGMv2_4527_8_39 37911 39080 + 9.A.8.1.5
pfam HRGMv2_4527_8 HRGMv2_4527_8_40 39204 41120 + Metallophos | Pur_ac_phosph_N
TC HRGMv2_4527_8 HRGMv2_4527_8_41 41272 42426 + 9.B.141.1.1
STP HRGMv2_4527_8 HRGMv2_4527_8_42 42680 43204 + Pribosyltran
TC HRGMv2_4527_8 HRGMv2_4527_8_43 43248 44609 + 2.A.40.7.6
CAZyme HRGMv2_4527_8 HRGMv2_4527_8_44 44742 45731 + CE4
pfam HRGMv2_4527_8 HRGMv2_4527_8_45 45697 46290 + SLH | SLH | SLH
pfam HRGMv2_4527_8 HRGMv2_4527_8_46 46344 47966 - Resolvase | Recombinase | Zn_ribbon_recom | DUF4368
TC HRGMv2_4527_8 HRGMv2_4527_8_47 48226 49059 + 9.A.8.1.5
Gene ID: HRGMv2_4527_8_39
Type: TC
Location: 37911 - 39080 (+)
Gene ID: HRGMv2_4527_8_40
Type: pfam
Location: 39204 - 41120 (+)
Gene ID: HRGMv2_4527_8_41
Type: TC
Location: 41272 - 42426 (+)
Gene ID: HRGMv2_4527_8_42
Type: STP
Location: 42680 - 43204 (+)
Gene ID: HRGMv2_4527_8_43
Type: TC
Location: 43248 - 44609 (+)
Gene ID: HRGMv2_4527_8_44
Type: CAZyme
Location: 44742 - 45731 (+)
Gene ID: HRGMv2_4527_8_45
Type: pfam
Location: 45697 - 46290 (+)
Gene ID: HRGMv2_4527_8_46
Type: pfam
Location: 46344 - 47966 (-)
Gene ID: HRGMv2_4527_8_47
Type: TC
Location: 48226 - 49059 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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