Cluster: HRGMv2_4527_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4527
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4527_7 | HRGMv2_4527_7_67 | 66818 | 67849 | + | GH177 |
| pfam | HRGMv2_4527_7 | HRGMv2_4527_7_68 | 68304 | 69029 | + | TraX |
| TC | HRGMv2_4527_7 | HRGMv2_4527_7_69 | 69122 | 69961 | - | 3.A.1.24.5 |
| TC | HRGMv2_4527_7 | HRGMv2_4527_7_70 | 70022 | 70675 | - | 3.A.1.24.5 |
| TC | HRGMv2_4527_7 | HRGMv2_4527_7_71 | 70662 | 71681 | - | 3.A.1.24.1 |
Gene ID: HRGMv2_4527_7_67
Type: CAZyme
Location: 66818 - 67849 (+)
Type: CAZyme
Location: 66818 - 67849 (+)
Gene ID: HRGMv2_4527_7_68
Type: pfam
Location: 68304 - 69029 (+)
Type: pfam
Location: 68304 - 69029 (+)
Gene ID: HRGMv2_4527_7_69
Type: TC
Location: 69122 - 69961 (-)
Type: TC
Location: 69122 - 69961 (-)
Gene ID: HRGMv2_4527_7_70
Type: TC
Location: 70022 - 70675 (-)
Type: TC
Location: 70022 - 70675 (-)
Gene ID: HRGMv2_4527_7_71
Type: TC
Location: 70662 - 71681 (-)
Type: TC
Location: 70662 - 71681 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum sp019421385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4527_7_69 | vegetarian > omnivore | 1.19988 | 0.00229 |
| HRGMv2_4527_7_70 | vegetarian > omnivore | 1.03707 | 0.00229 |