Cluster: HRGMv2_4527_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_4527
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4527_28 | HRGMv2_4527_28_18 | 18552 | 19613 | - | GH1 |
| TC | HRGMv2_4527_28 | HRGMv2_4527_28_19 | 19635 | 21509 | - | 4.A.1.2.11 |
| pfam | HRGMv2_4527_28 | HRGMv2_4527_28_20 | 21603 | 22439 | - | PRD | PRD | CAT_RBD |
| NULL(UNKNOWN) | HRGMv2_4527_28 | HRGMv2_4527_28_21 | 22787 | 23551 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4527_28 | HRGMv2_4527_28_22 | 23668 | 25557 | - | 3.A.1.134.6 |
| TC | HRGMv2_4527_28 | HRGMv2_4527_28_23 | 25544 | 26302 | - | 3.A.1.134.6 |
Gene ID: HRGMv2_4527_28_18
Type: CAZyme
Location: 18552 - 19613 (-)
Type: CAZyme
Location: 18552 - 19613 (-)
Gene ID: HRGMv2_4527_28_19
Type: TC
Location: 19635 - 21509 (-)
Type: TC
Location: 19635 - 21509 (-)
Gene ID: HRGMv2_4527_28_20
Type: pfam
Location: 21603 - 22439 (-)
Type: pfam
Location: 21603 - 22439 (-)
Gene ID: HRGMv2_4527_28_21
Type:
Location: 22787 - 23551 (-)
Type:
Location: 22787 - 23551 (-)
Gene ID: HRGMv2_4527_28_22
Type: TC
Location: 23668 - 25557 (-)
Type: TC
Location: 23668 - 25557 (-)
Gene ID: HRGMv2_4527_28_23
Type: TC
Location: 25544 - 26302 (-)
Type: TC
Location: 25544 - 26302 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum sp019421385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.