Cluster: HRGMv2_4527_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4527
- CGC Family ID: CGCFAM_08771
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4527_19 | HRGMv2_4527_19_3 | 1955 | 3067 | + | CE9 |
| TF | HRGMv2_4527_19 | HRGMv2_4527_19_4 | 3177 | 4028 | + | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4527_19 | HRGMv2_4527_19_5 | 4205 | 5224 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| TC | HRGMv2_4527_19 | HRGMv2_4527_19_6 | 5273 | 6673 | - | 2.A.22.5.3 |
| TC | HRGMv2_4527_19 | HRGMv2_4527_19_7 | 6737 | 7630 | - | 2.A.85.4.3 |
Gene ID: HRGMv2_4527_19_3
Type: CAZyme
Location: 1955 - 3067 (+)
Type: CAZyme
Location: 1955 - 3067 (+)
Gene ID: HRGMv2_4527_19_4
Type: TF
Location: 3177 - 4028 (+)
Type: TF
Location: 3177 - 4028 (+)
Gene ID: HRGMv2_4527_19_5
Type: pfam
Location: 4205 - 5224 (+)
Type: pfam
Location: 4205 - 5224 (+)
Gene ID: HRGMv2_4527_19_6
Type: TC
Location: 5273 - 6673 (-)
Type: TC
Location: 5273 - 6673 (-)
Gene ID: HRGMv2_4527_19_7
Type: TC
Location: 6737 - 7630 (-)
Type: TC
Location: 6737 - 7630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum sp019421385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.