Cluster: HRGMv2_4527_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4527
- CGC Family ID: CGCFAM_06610
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4527_11 | HRGMv2_4527_11_26 | 21244 | 23109 | + | 4.A.1.2.11 |
| pfam | HRGMv2_4527_11 | HRGMv2_4527_11_27 | 23115 | 23543 | + | Glyco_hydro_1 |
| CAZyme | HRGMv2_4527_11 | HRGMv2_4527_11_28 | 23556 | 24170 | + | GH1 |
| pfam | HRGMv2_4527_11 | HRGMv2_4527_11_29 | 24234 | 24554 | + | Glyco_hydro_1 |
| pfam | HRGMv2_4527_11 | HRGMv2_4527_11_30 | 24579 | 25412 | + | Hydrolase_3 |
| TC | HRGMv2_4527_11 | HRGMv2_4527_11_31 | 25573 | 27336 | - | 3.A.1.117.3 |
Gene ID: HRGMv2_4527_11_26
Type: TC
Location: 21244 - 23109 (+)
Type: TC
Location: 21244 - 23109 (+)
Gene ID: HRGMv2_4527_11_27
Type: pfam
Location: 23115 - 23543 (+)
Type: pfam
Location: 23115 - 23543 (+)
Gene ID: HRGMv2_4527_11_28
Type: CAZyme
Location: 23556 - 24170 (+)
Type: CAZyme
Location: 23556 - 24170 (+)
Gene ID: HRGMv2_4527_11_29
Type: pfam
Location: 24234 - 24554 (+)
Type: pfam
Location: 24234 - 24554 (+)
Gene ID: HRGMv2_4527_11_30
Type: pfam
Location: 24579 - 25412 (+)
Type: pfam
Location: 24579 - 25412 (+)
Gene ID: HRGMv2_4527_11_31
Type: TC
Location: 25573 - 27336 (-)
Type: TC
Location: 25573 - 27336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum sp019421385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.