Cluster: HRGMv2_4527_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4527
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4527_1 | HRGMv2_4527_1_133 | 127692 | 129842 | + | GH13_9 |
| pfam | HRGMv2_4527_1 | HRGMv2_4527_1_134 | 129904 | 131115 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_4527_1 | HRGMv2_4527_1_135 | 131126 | 132256 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_4527_1 | HRGMv2_4527_1_136 | 132427 | 133863 | + | GT5 |
| CAZyme | HRGMv2_4527_1 | HRGMv2_4527_1_137 | 133904 | 136351 | + | GT35 |
| TC | HRGMv2_4527_1 | HRGMv2_4527_1_138 | 136580 | 137143 | - | 2.A.107.1.2 |
Gene ID: HRGMv2_4527_1_133
Type: CAZyme
Location: 127692 - 129842 (+)
Type: CAZyme
Location: 127692 - 129842 (+)
Gene ID: HRGMv2_4527_1_134
Type: pfam
Location: 129904 - 131115 (+)
Type: pfam
Location: 129904 - 131115 (+)
Gene ID: HRGMv2_4527_1_135
Type: pfam
Location: 131126 - 132256 (+)
Type: pfam
Location: 131126 - 132256 (+)
Gene ID: HRGMv2_4527_1_136
Type: CAZyme
Location: 132427 - 133863 (+)
Type: CAZyme
Location: 132427 - 133863 (+)
Gene ID: HRGMv2_4527_1_137
Type: CAZyme
Location: 133904 - 136351 (+)
Type: CAZyme
Location: 133904 - 136351 (+)
Gene ID: HRGMv2_4527_1_138
Type: TC
Location: 136580 - 137143 (-)
Type: TC
Location: 136580 - 137143 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Butyricicoccaceae
Genus
Agathobaculum
Species
Agathobaculum sp019421385
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.