Cluster: HRGMv2_4526_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4526
- CGC Family ID: CGCFAM_02821
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4526_5 | HRGMv2_4526_5_89 | 106632 | 107237 | - | 3.D.1.8.1 |
| TC | HRGMv2_4526_5 | HRGMv2_4526_5_90 | 107283 | 108014 | - | 1.I.1.1.3 |
| pfam | HRGMv2_4526_5 | HRGMv2_4526_5_91 | 108158 | 108937 | - | Pro_isomerase |
| pfam | HRGMv2_4526_5 | HRGMv2_4526_5_92 | 109172 | 110029 | + | DegV |
| TC | HRGMv2_4526_5 | HRGMv2_4526_5_93 | 110103 | 111227 | - | 4.D.2.1.7 |
| CAZyme | HRGMv2_4526_5 | HRGMv2_4526_5_94 | 111229 | 112323 | - | GT4 |
Gene ID: HRGMv2_4526_5_89
Type: TC
Location: 106632 - 107237 (-)
Type: TC
Location: 106632 - 107237 (-)
Gene ID: HRGMv2_4526_5_90
Type: TC
Location: 107283 - 108014 (-)
Type: TC
Location: 107283 - 108014 (-)
Gene ID: HRGMv2_4526_5_91
Type: pfam
Location: 108158 - 108937 (-)
Type: pfam
Location: 108158 - 108937 (-)
Gene ID: HRGMv2_4526_5_92
Type: pfam
Location: 109172 - 110029 (+)
Type: pfam
Location: 109172 - 110029 (+)
Gene ID: HRGMv2_4526_5_93
Type: TC
Location: 110103 - 111227 (-)
Type: TC
Location: 110103 - 111227 (-)
Gene ID: HRGMv2_4526_5_94
Type: CAZyme
Location: 111229 - 112323 (-)
Type: CAZyme
Location: 111229 - 112323 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.