Cluster: HRGMv2_4526_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4526
- CGC Family ID: CGCFAM_00203
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4526_4 | HRGMv2_4526_4_15 | 11785 | 13143 | + | 2.A.40.1.4 |
| CAZyme | HRGMv2_4526_4 | HRGMv2_4526_4_16 | 13482 | 16505 | + | GH2 |
| TC | HRGMv2_4526_4 | HRGMv2_4526_4_17 | 16498 | 17370 | + | 3.A.1.1.4 |
| TC | HRGMv2_4526_4 | HRGMv2_4526_4_18 | 17370 | 18191 | + | 3.A.1.1.4 |
| TC | HRGMv2_4526_4 | HRGMv2_4526_4_19 | 18224 | 19513 | + | 3.A.1.1.4 |
Gene ID: HRGMv2_4526_4_15
Type: TC
Location: 11785 - 13143 (+)
Type: TC
Location: 11785 - 13143 (+)
Gene ID: HRGMv2_4526_4_16
Type: CAZyme
Location: 13482 - 16505 (+)
Type: CAZyme
Location: 13482 - 16505 (+)
Gene ID: HRGMv2_4526_4_17
Type: TC
Location: 16498 - 17370 (+)
Type: TC
Location: 16498 - 17370 (+)
Gene ID: HRGMv2_4526_4_18
Type: TC
Location: 17370 - 18191 (+)
Type: TC
Location: 17370 - 18191 (+)
Gene ID: HRGMv2_4526_4_19
Type: TC
Location: 18224 - 19513 (+)
Type: TC
Location: 18224 - 19513 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.