dbCAN Logo

Cluster: HRGMv2_4526_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4526_2 HRGMv2_4526_2_129 141215 142189 - CE4
pfam HRGMv2_4526_2 HRGMv2_4526_2_130 142369 143646 + Enolase_C | Enolase_N | MR_MLE_C
TC HRGMv2_4526_2 HRGMv2_4526_2_131 143825 145915 - 3.A.10.1.13
NULL(UNKNOWN) HRGMv2_4526_2 HRGMv2_4526_2_132 146557 146790 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4526_2 HRGMv2_4526_2_133 146926 147657 - ThiF
TC HRGMv2_4526_2 HRGMv2_4526_2_134 147856 150447 + 3.A.3.5.15
pfam HRGMv2_4526_2 HRGMv2_4526_2_135 150478 150750 + Trns_repr_metal
CAZyme HRGMv2_4526_2 HRGMv2_4526_2_136 150838 153927 - GH2
pfam HRGMv2_4526_2 HRGMv2_4526_2_137 154171 155034 + RrnaAD
CAZyme HRGMv2_4526_2 HRGMv2_4526_2_138 155074 156648 + GH77
CAZyme HRGMv2_4526_2 HRGMv2_4526_2_139 156645 158906 + GT35
TC HRGMv2_4526_2 HRGMv2_4526_2_140 159037 160206 - 3.A.1.2.12
peptidase HRGMv2_4526_2 HRGMv2_4526_2_141 160622 162070 - M20.UPD
TC HRGMv2_4526_2 HRGMv2_4526_2_142 162129 162872 - 3.A.1.3.25
TC HRGMv2_4526_2 HRGMv2_4526_2_143 162865 163554 - 3.A.1.3.15
Gene ID: HRGMv2_4526_2_129
Type: CAZyme
Location: 141215 - 142189 (-)
Gene ID: HRGMv2_4526_2_130
Type: pfam
Location: 142369 - 143646 (+)
Gene ID: HRGMv2_4526_2_131
Type: TC
Location: 143825 - 145915 (-)
Gene ID: HRGMv2_4526_2_132
Type:
Location: 146557 - 146790 (-)
Gene ID: HRGMv2_4526_2_133
Type: pfam
Location: 146926 - 147657 (-)
Gene ID: HRGMv2_4526_2_134
Type: TC
Location: 147856 - 150447 (+)
Gene ID: HRGMv2_4526_2_135
Type: pfam
Location: 150478 - 150750 (+)
Gene ID: HRGMv2_4526_2_136
Type: CAZyme
Location: 150838 - 153927 (-)
Gene ID: HRGMv2_4526_2_137
Type: pfam
Location: 154171 - 155034 (+)
Gene ID: HRGMv2_4526_2_138
Type: CAZyme
Location: 155074 - 156648 (+)
Gene ID: HRGMv2_4526_2_139
Type: CAZyme
Location: 156645 - 158906 (+)
Gene ID: HRGMv2_4526_2_140
Type: TC
Location: 159037 - 160206 (-)
Gene ID: HRGMv2_4526_2_141
Type: peptidase
Location: 160622 - 162070 (-)
Gene ID: HRGMv2_4526_2_142
Type: TC
Location: 162129 - 162872 (-)
Gene ID: HRGMv2_4526_2_143
Type: TC
Location: 162865 - 163554 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4526_2_141 vegetarian > vegan 1.28749 0.02695

🧭 Explore Read Mapping of CGC

← Back to Cluster List