Cluster: HRGMv2_4526_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4526
- CGC Family ID: CGCFAM_04625
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4526_2 | HRGMv2_4526_2_15 | 14663 | 17530 | + | 3.A.3.5.23 |
| STP | HRGMv2_4526_2 | HRGMv2_4526_2_16 | 17637 | 18530 | + | HhH-GPD |
| pfam | HRGMv2_4526_2 | HRGMv2_4526_2_17 | 18660 | 19523 | + | F_bP_aldolase |
| CAZyme | HRGMv2_4526_2 | HRGMv2_4526_2_18 | 19597 | 21093 | - | GH18 |
Gene ID: HRGMv2_4526_2_15
Type: TC
Location: 14663 - 17530 (+)
Type: TC
Location: 14663 - 17530 (+)
Gene ID: HRGMv2_4526_2_16
Type: STP
Location: 17637 - 18530 (+)
Type: STP
Location: 17637 - 18530 (+)
Gene ID: HRGMv2_4526_2_17
Type: pfam
Location: 18660 - 19523 (+)
Type: pfam
Location: 18660 - 19523 (+)
Gene ID: HRGMv2_4526_2_18
Type: CAZyme
Location: 19597 - 21093 (-)
Type: CAZyme
Location: 19597 - 21093 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.