Cluster: HRGMv2_4526_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4526
- CGC Family ID: CGCFAM_00308
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4526_1 | HRGMv2_4526_1_162 | 179497 | 180423 | + | 3.A.1.1.20 |
| TC | HRGMv2_4526_1 | HRGMv2_4526_1_163 | 180436 | 181248 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_4526_1 | HRGMv2_4526_1_164 | 181295 | 183055 | + | GH123 |
Gene ID: HRGMv2_4526_1_162
Type: TC
Location: 179497 - 180423 (+)
Type: TC
Location: 179497 - 180423 (+)
Gene ID: HRGMv2_4526_1_163
Type: TC
Location: 180436 - 181248 (+)
Type: TC
Location: 180436 - 181248 (+)
Gene ID: HRGMv2_4526_1_164
Type: CAZyme
Location: 181295 - 183055 (+)
Type: CAZyme
Location: 181295 - 183055 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.