Cluster: HRGMv2_4526_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4526
- CGC Family ID: CGCFAM_00029
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4526_1 | HRGMv2_4526_1_131 | 146216 | 147391 | - | GT4 |
| CAZyme | HRGMv2_4526_1 | HRGMv2_4526_1_132 | 147441 | 148547 | - | GT4 |
| CAZyme | HRGMv2_4526_1 | HRGMv2_4526_1_133 | 148566 | 149816 | - | GT4 |
| TC | HRGMv2_4526_1 | HRGMv2_4526_1_134 | 149850 | 150533 | - | 9.B.18.1.3 |
| pfam | HRGMv2_4526_1 | HRGMv2_4526_1_135 | 150577 | 151773 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| NULL(UNKNOWN) | HRGMv2_4526_1 | HRGMv2_4526_1_136 | 151850 | 153253 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4526_1 | HRGMv2_4526_1_137 | 153293 | 155209 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_4526_1_131
Type: CAZyme
Location: 146216 - 147391 (-)
Type: CAZyme
Location: 146216 - 147391 (-)
Gene ID: HRGMv2_4526_1_132
Type: CAZyme
Location: 147441 - 148547 (-)
Type: CAZyme
Location: 147441 - 148547 (-)
Gene ID: HRGMv2_4526_1_133
Type: CAZyme
Location: 148566 - 149816 (-)
Type: CAZyme
Location: 148566 - 149816 (-)
Gene ID: HRGMv2_4526_1_134
Type: TC
Location: 149850 - 150533 (-)
Type: TC
Location: 149850 - 150533 (-)
Gene ID: HRGMv2_4526_1_135
Type: pfam
Location: 150577 - 151773 (-)
Type: pfam
Location: 150577 - 151773 (-)
Gene ID: HRGMv2_4526_1_136
Type:
Location: 151850 - 153253 (-)
Type:
Location: 151850 - 153253 (-)
Gene ID: HRGMv2_4526_1_137
Type: TC
Location: 153293 - 155209 (-)
Type: TC
Location: 153293 - 155209 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.