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Cluster: HRGMv2_4526_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4526_13 HRGMv2_4526_13_22 14517 15407 + 3.A.1.1.3
TC HRGMv2_4526_13 HRGMv2_4526_13_23 15423 16310 + 3.A.1.1.18
pfam HRGMv2_4526_13 HRGMv2_4526_13_24 16329 16514 + DUF6903
CAZyme HRGMv2_4526_13 HRGMv2_4526_13_25 16547 18718 + GH112
sulfatase HRGMv2_4526_13 HRGMv2_4526_13_26 18787 20310 - S1_23
TC HRGMv2_4526_13 HRGMv2_4526_13_27 20317 21126 - 3.A.1.9.1
pfam HRGMv2_4526_13 HRGMv2_4526_13_28 21145 21966 - BPD_transp_1
TC HRGMv2_4526_13 HRGMv2_4526_13_29 21970 22719 - 3.A.1.9.2
Gene ID: HRGMv2_4526_13_22
Type: TC
Location: 14517 - 15407 (+)
Gene ID: HRGMv2_4526_13_23
Type: TC
Location: 15423 - 16310 (+)
Gene ID: HRGMv2_4526_13_24
Type: pfam
Location: 16329 - 16514 (+)
Gene ID: HRGMv2_4526_13_25
Type: CAZyme
Location: 16547 - 18718 (+)
Gene ID: HRGMv2_4526_13_26
Type: sulfatase
Location: 18787 - 20310 (-)
Gene ID: HRGMv2_4526_13_27
Type: TC
Location: 20317 - 21126 (-)
Gene ID: HRGMv2_4526_13_28
Type: pfam
Location: 21145 - 21966 (-)
Gene ID: HRGMv2_4526_13_29
Type: TC
Location: 21970 - 22719 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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