Cluster: HRGMv2_4526_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4526
- CGC Family ID: CGCFAM_01624
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4526_11 | HRGMv2_4526_11_59 | 52704 | 54455 | - | 3.A.1.135.5 |
| TC | HRGMv2_4526_11 | HRGMv2_4526_11_60 | 54443 | 56221 | - | 3.A.1.135.5 |
| CAZyme | HRGMv2_4526_11 | HRGMv2_4526_11_61 | 56425 | 57750 | + | GT8 |
| TC | HRGMv2_4526_11 | HRGMv2_4526_11_62 | 57806 | 59272 | - | 3.A.1.2.20 |
Gene ID: HRGMv2_4526_11_59
Type: TC
Location: 52704 - 54455 (-)
Type: TC
Location: 52704 - 54455 (-)
Gene ID: HRGMv2_4526_11_60
Type: TC
Location: 54443 - 56221 (-)
Type: TC
Location: 54443 - 56221 (-)
Gene ID: HRGMv2_4526_11_61
Type: CAZyme
Location: 56425 - 57750 (+)
Type: CAZyme
Location: 56425 - 57750 (+)
Gene ID: HRGMv2_4526_11_62
Type: TC
Location: 57806 - 59272 (-)
Type: TC
Location: 57806 - 59272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Negativibacillus
Species
Negativibacillus sp019423755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.