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Cluster: HRGMv2_4524_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4524_35 HRGMv2_4524_35_3 869 2038 + GH3
pfam HRGMv2_4524_35 HRGMv2_4524_35_4 2093 3427 - AcetylCoA_hydro | AcetylCoA_hyd_C
pfam HRGMv2_4524_35 HRGMv2_4524_35_5 3459 4001 - Metallophos | Metallophos_2
TC HRGMv2_4524_35 HRGMv2_4524_35_6 4121 5287 - 3.B.1.1.3
TC HRGMv2_4524_35 HRGMv2_4524_35_7 5303 5698 - 3.B.1.1.1
pfam HRGMv2_4524_35 HRGMv2_4524_35_8 5714 6046 - OAD_gamma
TC HRGMv2_4524_35 HRGMv2_4524_35_9 6058 7446 - 3.B.1.1.6
Gene ID: HRGMv2_4524_35_3
Type: CAZyme
Location: 869 - 2038 (+)
Gene ID: HRGMv2_4524_35_4
Type: pfam
Location: 2093 - 3427 (-)
Gene ID: HRGMv2_4524_35_5
Type: pfam
Location: 3459 - 4001 (-)
Gene ID: HRGMv2_4524_35_6
Type: TC
Location: 4121 - 5287 (-)
Gene ID: HRGMv2_4524_35_7
Type: TC
Location: 5303 - 5698 (-)
Gene ID: HRGMv2_4524_35_8
Type: pfam
Location: 5714 - 6046 (-)
Gene ID: HRGMv2_4524_35_9
Type: TC
Location: 6058 - 7446 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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