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Cluster: HRGMv2_4524_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4524_13 HRGMv2_4524_13_30 41866 42960 - GT2
pfam HRGMv2_4524_13 HRGMv2_4524_13_31 42918 43985 - EpsG
CAZyme HRGMv2_4524_13 HRGMv2_4524_13_32 44008 45114 - GT4
TC HRGMv2_4524_13 HRGMv2_4524_13_33 45133 45852 - 8.A.3.2.3
TC HRGMv2_4524_13 HRGMv2_4524_13_34 45836 46573 - 8.A.3.2.3
pfam HRGMv2_4524_13 HRGMv2_4524_13_35 46591 47313 - CpsB_CapC
CAZyme HRGMv2_4524_13 HRGMv2_4524_13_36 47329 48237 - GT2
TC HRGMv2_4524_13 HRGMv2_4524_13_37 48238 48921 - 9.B.18.1.3
Gene ID: HRGMv2_4524_13_30
Type: CAZyme
Location: 41866 - 42960 (-)
Gene ID: HRGMv2_4524_13_31
Type: pfam
Location: 42918 - 43985 (-)
Gene ID: HRGMv2_4524_13_32
Type: CAZyme
Location: 44008 - 45114 (-)
Gene ID: HRGMv2_4524_13_33
Type: TC
Location: 45133 - 45852 (-)
Gene ID: HRGMv2_4524_13_34
Type: TC
Location: 45836 - 46573 (-)
Gene ID: HRGMv2_4524_13_35
Type: pfam
Location: 46591 - 47313 (-)
Gene ID: HRGMv2_4524_13_36
Type: CAZyme
Location: 47329 - 48237 (-)
Gene ID: HRGMv2_4524_13_37
Type: TC
Location: 48238 - 48921 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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